Raw file	Enzyme	Enzyme mode	Enzyme first search	Enzyme mode first search	Use enzyme first search	Variable modifications	Variable modifications first search	Use variable modifications first search	Multiplicity	Max. missed cleavages	Max. labeled AAs	Labels0	Labels1	Labels2	LC-MS run type	Time-dependent recalibration	MS	MS/MS	MS/MS Submitted	MS/MS Submitted (SIL)	MS/MS Submitted (ISO)	MS/MS Submitted (PEAK)	MS/MS Identified	MS/MS Identified (SIL)	MS/MS Identified (ISO)	MS/MS Identified (PEAK)	MS/MS Identified [%]	MS/MS Identified (SIL) [%]	MS/MS Identified (ISO) [%]	MS/MS Identified (PEAK) [%]	Peptide Sequences Identified	Peaks	Peaks Sequenced	Peaks Sequenced [%]	Peaks Repeatedly Sequenced	Peaks Repeatedly Sequenced [%]	Isotope Patterns	Isotope Patterns Sequenced	Isotope Patterns Sequenced (z>1)	Isotope Patterns Sequenced [%]	Isotope Patterns Sequenced (z>1) [%]	Isotope Patterns Repeatedly Sequenced	Isotope Patterns Repeatedly Sequenced [%]	Multiplets	Multiplets z=1	Multiplets z=2	Multiplets z=3	Multiplets z=4	Multiplets z=5	Multiplets z=6	Multiplets Sequenced	Multiplets Sequenced [%]	Multiplets Repeatedly Sequenced	Multiplets Repeatedly Sequenced [%]	Multiplets Identified	Multiplets Identified [%]	Recalibrated	Av. Absolute Mass Deviation [ppm]	Mass Standard Deviation [ppm]	Av. Absolute Mass Deviation [mDa]	Mass Standard Deviation [mDa]	Label free norm param
SET1- 1A- NON LINEAR-1	Trypsin	Specific			False	Oxidation (M);BONCAT;Deamidation (NQ);Leucine(label);Met->aha(tag);Met->aha(tagMCL)		False	3	1	3	arg(norm);Lysine(norm)	Arg6;Lys6	Arg10;Lys8	Standard		13638	262205	381696	1486	140890	239320	31566	655	25334	5577	8.27	44.08	17.98	2.33	1499	4296800	84597	1.97	41642	49.22	283295	28050	22698	9.9	12.97	18598	66.3	304	158	72	59	12	3	0	113	37.17	96	84.96	35	30.97	+	1.7494	2.1881	29869	72273	
Total																	13638	262205	381696	1486	140890	239320	31566	655	25334	5577	8.27	44.08	17.98	2.33	1499	4296800					283295	28050	22698	9.9	12.97	18598	66.3	304	158	72	59	12	3	0	113	37.17	96	84.96	35	30.97		1.7494	2.1881	29869	72273	
